Abstract:
Background: Hepatocellular carcinoma (HCC) is the most common liver malignancy.
Early diagnosis of HCC has always been challenging. Hepatitis-C Virus (HCV)-
induced HCC makes up for 25% of HCC cases annually. Many studies have reported
the association of TGFβ-1 and IL-6 gene polymorphisms with the predisposition of
HCC. This study aims to assess the pathogenicity and the prevalence of IL-6 -174G/C
(rs1800795) and TGFβ-1 +29C/T (rs1800470) polymorphisms in HCV-infected HCC
patients.
Methodology: This study uses multiple bioinformatics tools to analyse the
pathogenicity of the TGFβ-1 +29 C/T and IL-6 -174 G/C polymorphisms. AliBaba2
was used to predict the transcription factor binding sites in the mutant and wild type IL 6 genes. The structural changes in the mutant TGFβ-1 structure were determined
through project HOPE. To assess the polymorphic prevalence of IL-6 -174 G/C and
TGFβ-1 +29 C/T genotypes in HCC and control subjects, ARMS-PCR was performed
on 213 diseased and 216 control samples. GraphPad Prism was used for the statistical
analysis of the results. CB Dock was used for the molecular docking analysis of
tetrahydroxyflavanone with IL-6 and TGFβ-1 proteins to predict its inhibitory potential
against the two cytokines.
Results: In-silico analysis revealed the regulatory nature of both IL-6 -174 G/C and
TGFβ-1 +29 C/T polymorphisms but with limited functional significance. The
structural variation in mutant TGFβ-1 such as Pro10Leu substitution might contribute
to the structural instability. An additional transcription factor binding site of nuclear factor-1 was identified in the mutant IL-6 structure. ARMS-PCR results revealed that
the individuals carrying TT genotype for TGFβ-1 gene have an increased risk of
developing HCC (p<0.0001, OR=5.403, RR=2.062) as compared to individuals with
CT and CC genotype. Similarly, GC genotype carriers for IL-6 gene exhibit an
increased risk of HCC susceptibility (p<0.0001, OR=2.276, RR=1.512) as compared to
the people carrying the GG genotype. The molecular docking results revealed
considerable docking efficiency of tetrahydroxyflavanone with IL-6 (-7.3 kJ/mol) and
TGFβ-1 (-7.7 kJ/mol) proteins. Compared to the conventional chemotherapy,
tetrahydroxyflavanonone shows a promising potential for treating HCC.
Conclusion: The TT genotype of TGFβ-1 gene and the GC genotype of IL-6 gene are
found to be associated with the development of HCC in patients.
Tetrahyrdoxyflavanone is proposed as a promising treatment option for HCC.